The genetic dataset from Caleta Huelen 12 comprises three individuals (n = 3). Results show one Y‑chromosome lineage assigned to haplogroup Q and mitochondrial haplogroups distributed as B2 (two individuals) and A2 (one individual). These lineages are widely documented across the Americas and are interpreted as deep, autochthonous Indigenous lineages rather than evidence of recent external input.
Haplogroup Q is the predominant Y‑lineage among many Indigenous populations of the Americas and its presence here is consistent with male-line continuity in coastal Chile. Maternal haplogroups B2 and A2 are among the most common Native American mtDNA clades; B2 is often associated with populations from both coastal and inland South America, while A2 is similarly widespread. The combination seen at Caleta Huelen 12 does not by itself indicate specific migration events or precise kinship ties within the community.
Crucially, sample size limits the strength of inference. With only three genomes, population-level statistics (admixture proportions, within-site diversity, demographic modeling) are underpowered. Archaeogenetic interpretation should therefore treat these data as preliminary indicators: they confirm the presence of classical Native American lineages at this coastal locale around 1100 BP, but larger and more geographically distributed samples are required to resolve questions about local continuity, gene flow with highland groups, or demographic shifts associated with broader regional transitions.
Future work combining additional ancient genomes, isotopic dietary data, and detailed stratigraphic context could turn this evocative snapshot into a full portrait of biological and cultural history.