Only four genomes from Koukounaries have been reported, so genetic inferences must be cautious. Among these individuals, one Y-chromosome is assigned to haplogroup J. Mitochondrial haplogroups observed include H, U and J. These markers are not unusual in the broader Mediterranean and Aegean: haplogroup J is found in Anatolia, the Levant and parts of the Mediterranean, while H and U are common maternal lineages across Europe and the Near East.
Archaeogenetic comparisons across the Bronze Age Aegean indicate a tapestry of ancestries — Neolithic farmer-descended populations, long-standing island lineages, and gene flow tied to interregional contacts. The Koukounaries individuals are consistent with this complex picture but do not by themselves define it. If integrated with larger regional datasets, these genomes could help track whether Paros experienced continuity from earlier Neolithic/Cycladic populations or received additional input during Late Bronze Age movements.
Because the sample count is low (n < 10), statements about population structure, migration, or sex-biased admixture are provisional. Limited evidence suggests affinities with Mediterranean-Anatolian genetic pools, but future samples from Paros and neighboring islands are essential to confirm patterns. Archaeological context — burial treatment, associated artifacts, and stratigraphy — will be critical to interpret any genetic signals responsibly.