Ancient DNA from four individuals recovered in the Rio Uncallane context yields a coherent, if sparse, genetic snapshot. Two male-line samples carry Y-chromosome haplogroup Q, a lineage widely observed among indigenous populations across the Americas and commonly interpreted as a founding paternal lineage in many Andean groups. On the maternal side, the mtDNA composition includes C1b (two individuals), C1c (one), and B2 (one) — all established Native American clades with deep roots in the continent.
These mitochondrial clades are consistent with long-standing maternal continuity in highland Peru, where C and B sublineages are frequently found in both ancient and modern Andean populations. The combination of Y-Q and mtDNA C/B lineages supports archaeological interpretations of local continuity rather than a wholesale replacement event during this interval. However, with only four genomes, population-level statistics (e.g., admixture proportions, effective population size estimates) are unreliable. Any inference about regional gene flow, kinship within the cemetery, or demographic shifts must be framed as tentative.
Future sampling that expands both temporal depth and geographic breadth across the Ilave basin will be critical to test whether these lineages reflect a stable local ancestry profile or are one snapshot within a more dynamic network of Andean interaction.
