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Research Publication

An early East Asian lineage with unexpectedly low Denisovan ancestry

Jiaqi Yang, Leonardo N.M. Iasi, Qiaomei Fu et al.

7 Authors
2025-10-20 Published
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

JY
Jiaqi Yang
LN
Leonardo N.M. Iasi
QF
Qiaomei Fu
NP
Niall P. Cooke
JK
Janet Kelso
SP
Stéphane Peyrégne
BM
Benjamin M. Peter
Chapter II

Abstract

Summary of the research findings

Denisovan ancestry in present-day humans is heterogeneously distributed and comes from genetically distinct Denisovan groups. Understanding the origin of this heterogeneity could provide insights into the early population history of modern humans in Eurasia. However, population movements and admixture after the initial dispersals of modern humans have obscured the origin of this heterogeneity. To address this, we investigated how Denisovan ancestry in early modern humans relates to that in present-day humans. We found that varying levels of Denisovan ancestry in Eurasians were shaped by admixture between diverse early modern human lineages. In particular, ancient Japanese individuals from the Jomon period have the least Denisovan ancestry among individuals from Eastern Eurasia, providing evidence for an ancient East Asian lineage with little to no Denisovan ancestry. By contrast, the earliest mainland East Asians harbor the most Denisovan ancestry in Eastern Eurasia, including ancestry from multiple divergent Denisovan groups, already before the last glacial maximum. Together with evidence of Denisovan ancestry sharing among ancient and present-day genomes, these patterns show how Denisovan ancestry in Eurasia spread through gene flow from early East Asians. Our study provides the first systematic investigation of Denisovan admixture across time and extends our understanding of human population history in Eurasia.

Chapter III

Analysis

Comprehensive review of ancestry and genetic findings

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Summary

Key Findings

Ancestry Insights

Traits Analysis

Historical Context

Scientific Assessment