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mtDNA Haplogroup • Maternal Lineage

C4A2A1

mtDNA Haplogroup C4A2A1

~6,000 years ago
Northeast Asia / Siberia
0 subclades
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Chapter I

The Story

The journey of mtDNA haplogroup C4A2A1

Origins and Evolution

mtDNA haplogroup C4A2A1 is a downstream branch of C4A2A within the broader C4 clade, a lineage rooted in northern Eurasia. Based on the phylogenetic position of C4A2A1 beneath C4A2A and population-level distributions, this subclade most likely formed in northeastern Asia/Siberia during the early Holocene (around 6 kya). Its emergence fits within a pattern of post-glacial diversification among maternal lineages adapted to northern forest-steppe and tundra environments in Siberia and adjacent regions.

Genetic surveys and ancient DNA studies of Holocene Siberia show that C4-related lineages were present among prehistoric hunter-gatherer and early pastoralist groups around the Lake Baikal region and across north-central Siberia. C4A2A1 preserves that northern signature and has been recovered in multiple modern Siberian populations as well as a number of archaeological individuals (the lineage appears in curated aDNA datasets, consistent with continuity of northern maternal ancestry through the Holocene).

Subclades (if applicable)

As a relatively specific subclade (C4A2A1), this lineage currently has limited further-resolved downstream branches published in broad population surveys; many studies report C4A2A1 at the level of the defined subclade rather than resolving many additional internal splits. Continued high-resolution mitogenome sequencing in Siberian and northeastern Asian samples may reveal further internal structure and local sublineages that reflect microregional demographic histories.

Geographical Distribution

Modern distribution: C4A2A1 is concentrated in northeastern Siberia and neighboring parts of northern East Asia, with appreciable frequencies among Sakha (Yakut) and several Tungusic- and Mongolic-speaking groups. It is also found among some North Siberian indigenous peoples (Nenets, Nganasan), in the Russian Far East (e.g., Chukchi, Koryak), and at lower frequencies in Central Asian groups with Siberian ancestry (Tuvans, Altaians) and northern East Asian populations (northern Han Chinese, Koreans). Occasional detections in northern and eastern Europe reflect historic and recent movements of Siberian-derived ancestry into Europe.

Ancient DNA evidence: This haplogroup (and closely related C4A2A lineages) has been identified in a number of Holocene archaeological samples from Siberia and adjacent regions (the curated dataset for this lineage includes multiple aDNA hits), supporting a long-standing presence in northern Eurasia through the Neolithic–Bronze Age transition and later periods.

Historical and Cultural Significance

The spatial pattern of C4A2A1 mirrors demographic processes characteristic of northern Eurasia: persistence of hunter-gatherer maternal lineages through the Holocene, local continuity around Lake Baikal and northeastern Siberia, and later movements associated with the spread of Tungusic and Mongolic groups and the demographic expansions that formed modern populations such as the Yakut. While not a marker of any single archaeological culture, C4A2A1 is part of the maternal substrate that contributed to the genetic makeup of several prehistoric and historic cultures in Siberia.

In historical times, later migrations and expansions (for example, the ethnogenesis and northward spread of Yakut-speaking groups) redistributed northern mtDNA lineages; this can account for relatively high frequencies in some northeastern Siberian populations today and the sporadic presence of the lineage in areas affected by Siberian admixture.

Conclusion

C4A2A1 is a northern Eurasian maternal lineage that arose in northeastern Asia/Siberia in the Holocene and persists today among a range of Siberian, Tungusic and Mongolic-speaking populations. Its presence in ancient DNA from the region and in modern indigenous groups underscores its role in the genetic continuity of northern Asian maternal ancestry, while its lower-frequency detections in Central/East Asia and Europe reflect later admixture and mobility.

(Notes: lineage age and geographic emphasis are inferred from the position of C4A2A1 under C4A2A and from published population and ancient DNA patterns for C4 clades in Siberia and neighboring regions.)

Key Points

  • Origins and Evolution
  • Subclades (if applicable)
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 C4A2A1 Current ~6,000 years ago 🪨 Chalcolithic 6,000 years 0 0 0
2 C4A2A ~6,000 years ago 🪨 Chalcolithic 6,000 years 1 1 17
3 C4A2 ~10,000 years ago 🌾 Neolithic 10,000 years 2 6 0
4 C4A ~15,000 years ago 🏹 Mesolithic 15,000 years 2 18 18
5 C4 ~20,000 years ago 🏹 Mesolithic 20,000 years 7 34 48
6 C ~35,000 years ago 🦴 Paleolithic 35,000 years 5 617 75

Subclades (0)

Terminal branch - no known subclades

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Northeast Asia / Siberia

Modern Distribution

The populations where mtDNA haplogroup C4A2A1 is found include:

  1. Yakut (Sakha) and other Sakha-region groups
  2. Tungusic-speaking peoples (e.g., Evenk, Even)
  3. Nenets, Nganasan and other North Siberian indigenous groups
  4. Chukchi and Koryak (Far East Siberia)
  5. Mongolic-speaking groups (e.g., Buryats, some Mongolians)
  6. Tuvans, Altaians and other Central Asian groups with Siberian ancestry
  7. Northern East Asian populations at low frequency (northern Han Chinese, Koreans)
  8. Occasional detections in northern/eastern Europe in contexts of Siberian-derived admixture or recent mobility
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~6k years ago

Haplogroup C4A2A1

Your mtDNA haplogroup emerged in Northeast Asia / Siberia

Northeast Asia / Siberia
~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup C4A2A1

Cultural Heritage

These ancient cultures have been linked to haplogroup C4A2A1 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Khovsgol Culture Lake Baikal Culture Lena River Culture Medieval Tuv Miaozigou Culture Shamanka Culture Slab Grave Culture Ust-Belaya Culture
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

17 direct carriers of haplogroup C4A2A1

17 / 17 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual ZAA002 from Mongolia, dated 596 CE - 656 CE
ZAA002
Mongolia Early to Late Medieval Mongolia 596 CE - 656 CE Medieval Mongolia C4a2a1 Direct
Portrait of ancient individual SP-9 from Hungary, dated 960 CE - 1000 CE
SP-9
Hungary Conqueror Elite Hungary 960 CE - 1000 CE Magyar Elite Culture C4a2a1 Direct
Portrait of ancient individual I7032 from Mongolia, dated 981 BCE - 832 BCE
I7032
Mongolia Early Iron Age Slab Grave Culture 1, Mongolia 981 BCE - 832 BCE Slab Grave Culture C4a2a1 Direct
Portrait of ancient individual ARG003 from Mongolia, dated 1000 CE - 1500 CE
ARG003
Mongolia Late Medieval Tuv, Mongolia 1000 CE - 1500 CE Medieval Tuv C4a2a1 Direct
Portrait of ancient individual ARS012 from Mongolia, dated 1412 BCE - 1126 BCE
ARS012
Mongolia Late Bronze Age Khovsgol 6, Mongolia 1412 BCE - 1126 BCE Khovsgol Culture C4a2a1 Direct
Portrait of ancient individual KPT006 from Russia, dated 1735 BCE - 1622 BCE
KPT006
Russia Early Bronze Age Lena River, Siberia, Russia 1735 BCE - 1622 BCE Lena River Culture C4a2a1 Direct
Portrait of ancient individual DA334 from Russia, dated 2284 BCE - 2055 BCE
DA334
Russia Early Bronze Age Shamanka, Russia 2284 BCE - 2055 BCE Shamanka Culture C4a2a1 Direct
Portrait of ancient individual irk076 from Russia, dated 2284 BCE - 2037 BCE
irk076
Russia Bronze Age Lake Baikal, Russia 2284 BCE - 2037 BCE Lake Baikal Culture C4a2a1 Direct
Portrait of ancient individual DA334 from Russia, dated 2284 BCE - 2055 BCE
DA334
Russia Early Bronze Age Cis-Baikal, Siberia 2284 BCE - 2055 BCE C4a2a1 Direct
Portrait of ancient individual irk076 from Russia, dated 2284 BCE - 2037 BCE
irk076
Russia Early Bronze Age Cis-Baikal, Siberia 2284 BCE - 2037 BCE C4a2a1 Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 17 ancient DNA samples (direct and subclade carriers of C4A2A1)

Direct carrier
Time Period Filter
All Time Periods
Showing all samples
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution by country of origin (direct and subclade carriers shown by default)

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods (direct and subclade carriers shown by default)

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.