Menu
mtDNA Haplogroup • Maternal Lineage

H3Z1

mtDNA Haplogroup H3Z1

~4,000 years ago
Iberian Peninsula / Atlantic Europe
0 subclades
Scroll to explore
Chapter I

The Story

The journey of mtDNA haplogroup H3Z1

Origins and Evolution

mtDNA haplogroup H3 derives from a broader West‑Eurasian H lineage associated with post‑Last Glacial Maximum (LGM) re‑expansions from southwestern European refugia. H3Z is a downstream branch that most population genetic evidence places within the Iberian/Atlantic European maternal pool during the Early to Mid‑Holocene. H3Z1 is a further subdivision of H3Z that likely formed later, plausibly during the Late Neolithic to Early Bronze Age (roughly 4–5 kya), reflecting a localized founder or drift event on the Atlantic margin. Its time depth and phylogenetic placement indicate it is a relatively young, regionally concentrated maternal lineage rather than a deep basal branch of H.

Subclades

H3Z1 itself is a defined terminal clade within the H3Z branch. At present, published variation and available phylogenies show only a small number of downstream lineages (if any) under H3Z1; many reports treat it as a terminal or near‑terminal branch in modern samples. Ancient DNA evidence for H3Z1 is limited but present (one archaeological sample recorded in the referenced database), which supports continuity of regional maternal lineages in at least some local contexts. Ongoing sequencing and expanded aDNA sampling may reveal additional micro‑subclades or finer geographic structure.

Geographical Distribution

H3Z1 is concentrated in the Atlantic/Iberian region with lower frequencies spreading into neighboring areas. Modern and ancient sample distributions are consistent with origin in the Iberian Peninsula and spread along western European coasts: elevated presence in Iberian populations (including Basques), detectable frequencies in Atlantic France and the British Isles, and sporadic occurrences in southern Europe (including parts of Italy and Sardinia) and Northwest Africa. Low, scattered occurrences in the Near East/Anatolia likely reflect broader late Holocene movements and historical gene flow rather than primary origin.

Historical and Cultural Significance

The geographic and temporal profile of H3Z1 is consistent with maternal continuity and regional diversification following post‑glacial recolonization and subsequent Neolithic and Bronze Age demographic events. Its emergence around the Late Neolithic/Early Bronze Age implicates possible involvement with maritime/Aegean‑Atlantic interaction spheres and Atlantic coastal population processes. H3Z1 may appear in contexts associated with the Bell Beaker phenomenon and later Atlantic Bronze Age societies, where maternal lineages from Iberia contributed to regional genetic structure. The haplogroup’s presence at low frequencies in Northwest Africa and the Near East reflects prehistoric and historic contact across the western Mediterranean.

Conclusion

H3Z1 represents a localized, relatively young maternal lineage within the Iberian/Atlantic H3Z radiation. It illustrates how post‑LGM refugial lineages continued to differentiate in western Europe and how later Neolithic and Bronze Age movements shaped fine‑scale maternal diversity. The scarcity of aDNA hits so far limits detailed demographic inferences, so expanded whole‑mitogenome sequencing and broader ancient sampling along the Atlantic façade will help clarify H3Z1’s origin, spread, and substructure.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 H3Z1 Current ~4,000 years ago 🔶 Bronze Age 4,500 years 0 2 0
2 H3Z ~6,000 years ago 🪨 Chalcolithic 6,000 years 1 4 1
3 H3 ~10,000 years ago 🌾 Neolithic 10,000 years 25 340 23
4 H ~25,000 years ago 🦴 Paleolithic 25,000 years 9 6,551 991
5 HV ~30,000 years ago 🦴 Paleolithic 30,000 years 10 7,905 228
6 R ~60,000 years ago 🦴 Paleolithic 60,000 years 12 10,987 57
7 N ~60,000 years ago 🦴 Paleolithic 60,000 years 15 15,452 13
8 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 11 17,621 6
9 L ~160,000 years ago 🦴 Paleolithic 160,000 years 7 18,987 5

Subclades (0)

Terminal branch - no known subclades

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

Iberian Peninsula / Atlantic Europe

Modern Distribution

The populations where MTDNA haplogroup H3Z1 is found include:

  1. Iberian populations (Spain, Portugal, including Basques)
  2. Western Europeans (France, Atlantic France, British Isles)
  3. Southern Europeans (parts of Italy, Sardinia at lower frequencies)
  4. Northwest Africa (Maghreb, lower frequencies due to historical/prehistoric gene flow)
  5. Near East / Anatolia (low frequencies, reflecting broader H presence and later movements)
  6. Modern populations in the Atlantic fringe and diaspora communities (variable, generally low to moderate)
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~4k years ago

Haplogroup H3Z1

Your mtDNA haplogroup emerged in Iberian Peninsula / Atlantic Europe

Iberian Peninsula / Atlantic Europe
~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup H3Z1

Cultural Heritage

These ancient cultures have been linked to haplogroup H3Z1 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Baalberge Culture French Neolithic Lepenski Vir Culture Middle Neolithic French Montenegrin Bronze Age Occitanie Neolithic Portuguese Neolithic
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Chapter V

Sample Catalog

1 direct carrier of haplogroup H3Z1

1 / 1 samples
Portrait Sample Country Era Date Culture mtDNA Match
Portrait of ancient individual I14499 from Montenegro, dated 1450 BCE - 1250 BCE
I14499
Montenegro Middle to Late Bronze Age Montenegro 1450 BCE - 1250 BCE Montenegrin Bronze Age H3z1 Direct
Chapter VI

Carrier Distribution Map

Geographic distribution of 1 ancient DNA sample (direct and subclade carriers of H3Z1)

Direct carrier
Time Period Filter
All Time Periods
Showing all samples
Chapter VII

Temporal Distribution

Distribution of carriers across archaeological periods

Chapter VIII

Geographic Distribution

Distribution by country of origin (direct and subclade carriers shown by default)

Chapter IX

Country × Era Distribution

Cross-tabulation of carrier countries and archaeological periods (direct and subclade carriers shown by default)

Data

Data & Provenance

Source information and data quality

Last Updated 2026-02-16
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.