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GWAS Study

A genome-wide association study identifies new susceptibility loci for non-cardia gastric cancer at 3q13.31 and 5p13.1.

Shi Y, Hu Z, Wu C et al.

22037551 PubMed ID
GWAS Study Type
10176 Participants
42 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SY
Shi Y
HZ
Hu Z
WC
Wu C
DJ
Dai J
LH
Li H
DJ
Dong J
WM
Wang M
MX
Miao X
ZY
Zhou Y
LF
Lu F
ZH
Zhang H
HL
Hu L
JY
Jiang Y
LZ
Li Z
CM
Chu M
MH
Ma H
CJ
Chen J
JG
Jin G
TW
Tan W
WT
Wu T
ZZ
Zhang Z
LD
Lin D
SH
Shen H
Chapter II

Abstract

Summary of the research findings

Gastric cancer, including the cardia and non-cardia types, is the second leading cause of cancer-related deaths worldwide. To identify genetic risk variants for non-cardia gastric cancer, we performed a genome-wide association study in 3,279 individuals (1,006 with non-cardia gastric cancer and 2,273 controls) of Chinese descent. We replicated significant associations in an additional 6,897 subjects (3,288 with non-cardia gastric cancer and 3,609 controls). We identified two new susceptibility loci for non-cardia gastric cancer at 5p13.1 (rs13361707 in the region including PTGER4 and PRKAA1; odds ratio (OR) = 1.41; P = 7.6 × 10(-29)) and 3q13.31 (rs9841504 in ZBTB20; OR = 0.76; P = 1.7 × 10(-9)). Imputation analyses also confirmed previously reported associations of rs2294008 and rs2976392 on 8q24, rs4072037 on 1q22 and rs13042395 on 20p13 with non-cardia gastric cancer susceptibility in the Han Chinese population.

1,006 Han Chinese ancestry cases, 2,273 Han Chinese ancestry controls

Chapter III

Study Statistics

Key metrics and study information

10176
Total Participants
GWAS
Study Type
Yes
Replicated
3,288 Han Chinese ancestry cases, 3,609 Han Chinese ancestry controls
Replication Participants
East Asian
Ancestry
China
Recruitment Country
Chapter IV

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