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GWAS Study

Genome-wide association screens for Achilles tendon and ACL tears and tendinopathy.

Kim SK, Roos TR, Roos AK et al.

28358823 PubMed ID
GWAS Study Type
102979 Participants
118 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

KS
Kim SK
RT
Roos TR
RA
Roos AK
KJ
Kleimeyer JP
AM
Ahmed MA
GG
Goodlin GT
FM
Fredericson M
IJ
Ioannidis JP
AA
Avins AL
DJ
Dragoo JL
Chapter II

Abstract

Summary of the research findings

Achilles tendinopathy or rupture and anterior cruciate ligament (ACL) rupture are substantial injuries affecting athletes, associated with delayed recovery or inability to return to competition. To identify genetic markers that might be used to predict risk for these injuries, we performed genome-wide association screens for these injuries using data from the Genetic Epidemiology Research on Adult Health and Aging (GERA) cohort consisting of 102,979 individuals. We did not find any single nucleotide polymorphisms (SNPs) associated with either of these injuries with a p-value that was genome-wide significant (p<5x10-8). We found, however, four and three polymorphisms with p-values that were borderline significant (p<10-6) for Achilles tendon injury and ACL rupture, respectively. We then tested SNPs previously reported to be associated with either Achilles tendon injury or ACL rupture. None showed an association in our cohort with a false discovery rate of less than 5%. We obtained, however, moderate to weak evidence for replication in one case; specifically, rs4919510 in MIR608 had a p-value of 5.1x10-3 for association with Achilles tendon injury, corresponding to a 7% chance of false replication. Finally, we tested 2855 SNPs in 90 candidate genes for musculoskeletal injury, but did not find any that showed a significant association below a false discovery rate of 5%. We provide data containing summary statistics for the entire genome, which will be useful for future genetic studies on these injuries.

4,258 European ancestry cases, 413 Latin-American cases, 268 East Asian ancestry cases, 192 African American cases, 17 South East Asian ancestry cases, 79,006 European ancestry controls, 8,147 Latin-American controls, 7,250 East Asian ancestry controls, 2,969 African American controls, 459 South East Asian ancestry controls

Chapter III

Study Statistics

Key metrics and study information

102979
Total Participants
GWAS
Study Type
No
Replicated
Hispanic or Latin American, East Asian, African American or Afro-Caribbean, European, South East Asian
Ancestry
U.S.
Recruitment Country
Chapter IV

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