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Identification of novel and rare variants associated with handgrip strength using whole genome sequence data from the NHLBI Trans-Omics in Precision Medicine (TOPMed) Program.

Sarnowski C, Chen H, Biggs ML et al.

34214102 PubMed ID
GWAS Study Type
13552 Participants
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

SC
Sarnowski C
CH
Chen H
BM
Biggs ML
WS
Wassertheil-Smoller S
BJ
Bressler J
IM
Irvin MR
RK
Ryan KA
KD
Karasik D
AD
Arnett DK
CL
Cupples LA
FD
Fardo DW
GS
Gogarten SM
HB
Heavner BD
JD
Jain D
KH
Kang HM
KC
Kooperberg C
MA
Mainous AG
MB
Mitchell BD
MA
Morrison AC
OJ
O'Connell JR
PB
Psaty BM
RK
Rice K
SA
Smith AV
VR
Vasan RS
WB
Windham BG
KD
Kiel DP
MJ
Murabito JM
LK
Lunetta KL
Chapter II

Abstract

Summary of the research findings

Handgrip strength is a widely used measure of muscle strength and a predictor of a range of morbidities including cardiovascular diseases and all-cause mortality. Previous genome-wide association studies of handgrip strength have focused on common variants primarily in persons of European descent. We aimed to identify rare and ancestry-specific genetic variants associated with handgrip strength by conducting whole-genome sequence association analyses using 13,552 participants from six studies representing diverse population groups from the Trans-Omics in Precision Medicine (TOPMed) Program. By leveraging multiple handgrip strength measures performed in study participants over time, we increased our effective sample size by 7-12%. Single-variant analyses identified ten handgrip strength loci among African-Americans: four rare variants, five low-frequency variants, and one common variant. One significant and four suggestive genes were identified associated with handgrip strength when aggregating rare and functional variants; all associations were ancestry-specific. We additionally leveraged the different ancestries available in the UK Biobank to further explore the ancestry-specific association signals from the single-variant association analyses. In conclusion, our study identified 11 new loci associated with handgrip strength with rare and/or ancestry-specific genetic variations, highlighting the added value of whole-genome sequencing in diverse samples. Several of the associations identified using single-variant or aggregate analyses lie in genes with a function relevant to the brain or muscle or were reported to be associated with muscle or age-related traits. Further studies in samples with sequence data and diverse ancestries are needed to confirm these findings.

13,552 European, African American or Afro-Caribbean, Hispanic or Latin American, Asian, Native American, Other ancestry individuals

Chapter III

Study Statistics

Key metrics and study information

13552
Total Participants
GWAS
Study Type
No
Replicated
European, African American or Afro-Caribbean, Hispanic or Latin American, Asian unspecified, Native American, Other
Ancestry
U.S.
Recruitment Country
Chapter IV

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