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GWAS Study

Identification of the TIFAB Gene as a Susceptibility Locus for Coronary Artery Aneurysm in Patients with Kawasaki Disease.

Kwon YC, Kim JJ, Yu JJ et al.

30267110 PubMed ID
GWAS Study Type
792 Participants
53 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

KY
Kwon YC
KJ
Kim JJ
YJ
Yu JJ
YS
Yun SW
YK
Yoon KL
LK
Lee KY
KH
Kil HR
KG
Kim GB
HM
Han MK
SM
Song MS
LH
Lee HD
HK
Ha KS
SS
Sohn S
HY
Hong YM
JG
Jang GY
LJ
Lee JK
Chapter II

Abstract

Summary of the research findings

Kawasaki disease (KD) is a self-limiting systemic vasculitis of unknown etiology. KD is often complicated by coronary artery aneurysms (CAAs), which develop in about 20-25% of untreated children and 3-5% of children treated with intravenous immunoglobulin therapy. To identify the risk loci for CAA susceptibility in patients with KD, we performed a genome-wide association study (GWAS) using our previous Illumina HumanOmni1-Quad BeadChip data (296 KD patients) and a new replication study in an independent sample set (713 KD patients) by grouping KD patients without CAA (control) versus KD patients with extremely large aneurysms (diameter ≥ 5 mm) (case). Among 44 candidate single -nucleotide polymorphisms (SNPs) selected from the initial GWAS data (33 cases vs. 215 controls), a SNP (rs899162) located 7 kb upstream of the TIFAB gene on chromosome five was replicated in an independent sample (12 cases vs. 532 controls). In the combined analysis (45 cases vs. 747 controls), the SNP (rs899162) showed a highly significant association with CAA formation (diameter ≥ 5 mm) in patients with KD (odds ratio = 3.20, 95% confidence interval = 2.02-5.05, Pcombined = 1.95 × 10-7). These results indicate that the TIFAB gene may act as a CAA susceptibility locus in patients with KD.

33 cases, 215 controls

Chapter III

Study Statistics

Key metrics and study information

792
Total Participants
GWAS
Study Type
Yes
Replicated
12 cases, 532 controls
Replication Participants
Chapter IV

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