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GWAS Study

Identification of the BTN3A3 gene as a molecule implicated in generalized pustular psoriasis in a Chinese population.

Zhang Q, Shi P, Wang Z et al.

36804966 PubMed ID
GWAS Study Type
685 Participants
48 Views
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Chapter I

Publication Details

Comprehensive information about this research publication

Authors

ZQ
Zhang Q
SP
Shi P
WZ
Wang Z
SL
Sun L
LW
Li W
ZQ
Zhao Q
LT
Liu T
PQ
Pan Q
SY
Sun Y
JF
Jia F
CW
Chen W
FX
Fu X
YG
Yu G
BF
Bao F
MZ
Mi Z
WC
Wang C
SY
Sun Y
LB
Li B
LJ
Liu J
LH
Liu H
GH
Gu H
ZF
Zhang F
Chapter II

Abstract

Summary of the research findings

The discovery of pathogenic variants provided biological insight into the role of host genetic factors in generalized pustular psoriasis (GPP). However, not all those affected by GPP carry variants in the reported genes. To comprehensively explore the molecular pathogenesis of GPP, whole-exome sequencing was performed, and two loci were identified with exome-wide significance through single variant association analysis: rs148755083 in the IL36RN gene (Pcombined = 1.19 × 10-18, OR = 8.26) and HLA-C∗06:02 within the major histocompatibility complex region (Pcombined = 8.38 × 10-12, OR = 2.98). Gene burden testing revealed that BTN3A3 correlated with GPP (Pcombined = 1.14 × 10-10, OR = 5.59). Subtype analysis showed that IL36RN and BTN3A3 were both significantly associated with GPP alone and GPP with psoriasis vulgaris, whereas a correlation with HLA-C∗06:02 was only observed in GPP with psoriasis vulgaris. Functional analysis revealed that BTN3A3 regulated cell proliferation and inflammatory balance in GPP. In particular, loss of function of BTN3A3 activated NF-κB and promoted the production of inflammatory cytokines by inhibiting IL-36Ra expression to disturb the IL-1/IL-36 inflammatory axis and enhance the TNF-α-mediated pathway. Our findings identify BTN3A3 as, to our knowledge, a previously unreported pathogenic determinant, expanding our understanding of the genetic basis of GPP.

161 Chinese Han ancestry cases, 364 Chinese Han ancestry controls

Chapter III

Study Statistics

Key metrics and study information

685
Total Participants
GWAS
Study Type
Yes
Replicated
60 Chinese Han ancestry cases, 100 Chinese Han ancestry controls
Replication Participants
East Asian
Ancestry
China
Recruitment Country
Chapter IV

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