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mtDNA Haplogroup • Maternal Lineage

M45

mtDNA Haplogroup M45

~18,000 years ago
South Asia / adjacent Central-South Asia
0 subclades
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Chapter I

The Story

The journey of mtDNA haplogroup M45

Origins and Evolution

mtDNA haplogroup M45 is defined as a subclade within the broader M4"67 branch of macro-haplogroup M. As an intermediate node in the phylogeny, M45 likely arose after the initial expansion of macro-haplogroup M into South and Southeast Asia and appears to have diversified around the end of the Last Glacial Maximum or in the early post‑glacial period (roughly ~20–15 kya, with uncertainty). Phylogenetic placement within M4"67 implies that M45 shares ancestral variants with other M4 and M67-derived lineages; coalescent dating and full mitogenome sequencing of related subclades are the primary methods used to estimate its age and branching order.

Because M45 is an intermediate/connecting clade, its precise time-depth and internal structure remain subject to refinement as more whole-mtDNA sequences from under-sampled regions are published. Current inferences rely on the position of M45 within M4"67 and the geographic patterns of closely related M subclades.

Subclades

At present, M45 is best treated as an intermediate clade that may contain or lead to additional named subclades in future revisions of the phylogeny. Detailed subclade structure within M45 is incompletely resolved in public databases, largely due to limited full mitogenome sampling from certain South Asian and Central Asian populations. Targeted sequencing of complete mitochondrial genomes from tribal, caste, Himalayan, and Central Asian groups is likely to reveal further branching beneath M45.

Geographical Distribution

Based on the distribution of its parent M4"67 and neighboring M lineages, M45 is most plausibly concentrated in the Indian subcontinent and adjoining areas, with lower-frequency occurrences in Central Asia, the Himalayas and parts of Southeast Asia due to historical gene flow and later population movements. Reported observations of related M4/M67 derivatives in tribal and caste populations of South Asia and in Tibeto-Burman/Himalayan groups support a predominantly South Asian origin with secondary spread into neighboring regions.

Distributional patterns should be considered provisional: published frequency data for M45 itself are sparse, and many regional population surveys have historically typed only control-region markers or partial mtDNA motifs rather than complete mitogenomes, which can obscure detection of M45.

Historical and Cultural Significance

If M45 diversified in the Late Upper Paleolithic or early Holocene, it would have been carried by hunter-gatherer and early forager communities that later experienced cultural transitions such as Mesolithic adaptations and, in some regions, the adoption of agriculture during the Neolithic. In South Asia, maternal lineages related to M4"67 participated in the gene pool that later contributed to Bronze Age and historic populations (including those of the Indus Valley sphere), although direct ties between M45 and specific archaeological cultures remain indirect until more ancient DNA or high-resolution modern mitogenomes are reported.

M45 today may be found among both tribal (indigenous) and non-tribal populations in South Asia, reflecting deep local continuity as well as later demographic processes (migration, language spread, trade). In the Himalayan and Central Asian borderlands, presence of M45-like lineages could reflect long-term northward gene flow and local admixture events.

Conclusion

mtDNA haplogroup M45 represents a moderately deep maternal lineage within M4"67, with an inferred origin in South Asia or nearby regions in the late Pleistocene/post‑glacial interval (~18 kya). Its role as an intermediate clade highlights the importance of increased mitogenome sampling across South Asia, the Himalayas and Central Asia to resolve its internal structure, geographic limits, and historical dynamics. Until more complete sequences and ancient DNA samples are reported, statements about precise frequencies, detailed subclades, and culture-specific associations must remain cautious and provisional.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 M45 Current ~18,000 years ago 🏹 Mesolithic 18,000 years 0 0 0
2 M4"67 — — — 8 111 0
3 M ~60,000 years ago 🦴 Paleolithic 60,000 years 42 2,162 41
4 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 7 23,542 6
5 L3'4 — — — 2 23,581 0
6 L3'4'6 — — — 2 23,584 0
7 L2'3'4'6 — — — 2 24,475 0
8 L2'3'4'5'6'7 — — — 2 24,488 0
9 L1'2'3'4'5'6'7 — — — 2 24,903 0
10 L ~160,000 years ago 🦴 Paleolithic 160,000 years 2 25,205 5

Subclades (0)

Terminal branch - no known subclades

Siblings (7)

Other branches from the same parent haplogroup

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

South Asia / adjacent Central-South Asia

Modern Distribution

The populations where mtDNA haplogroup M45 is found include:

  1. Tribal and caste populations of the Indian subcontinent (South Asia)
  2. Himalayan and Tibeto-Burman speaking groups (Nepal, Bhutan, Northeast India)
  3. Selected Central Asian groups (border regions adjoining South Asia)
  4. Some Southeast Asian populations via low-frequency gene flow
  5. Modern diasporas originating from South Asia
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~20k years ago

Last Glacial Maximum

Peak of the last ice age, populations isolated

~18k years ago

Haplogroup M45

Your mtDNA haplogroup emerged in South Asia / adjacent Central-South Asia

South Asia / adjacent Central-South Asia
~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup M45

Cultural Heritage

These ancient cultures have been linked to haplogroup M45 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Andamanese British Neolithic Goyet Cave Gravettian Loebanr Culture Medieval Italian Ostuni Culture Roopkund Culture Spanish Gravettian
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Data

Data & Provenance

Source information and data quality

Last Updated 2026-06-14
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.