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mtDNA Haplogroup • Maternal Lineage

M64

mtDNA Haplogroup M64

~15,000 years ago
South Asia / Southeast Asia
0 subclades
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Chapter I

The Story

The journey of mtDNA haplogroup M64

Origins and Evolution

mtDNA haplogroup M64 sits as an intermediate subclade within the broader M4"67 (M4'67) branch of macro-haplogroup M. Macro-haplogroup M is one of the principal non-African maternal lineages that diversified soon after the Out-of-Africa migration. Given the phylogenetic position under M4"67 and the geographic pattern of closely related M4-derived lineages, M64 most plausibly originated in the South Asian or adjacent Southeast Asian region during the late Pleistocene or early Holocene (order of ~10–20 kya). The proposed age is conservative and reflects both the deep antiquity of M-based lineages in South/Southeast Asia and the typical coalescence times observed for analogous minor M subclades.

Subclades

As an intermediate clade, M64 may include or give rise to finer sublineages in well-sampled datasets, but published phylogenies and population screens currently report only limited resolution below the M64 node. In many cases M64 is recorded as part of a chain of private mutations linking broader M4"67 diversity to locally restricted descendant haplotypes. Increased full mitochondrial genome sequencing in South and Southeast Asia is required to resolve internal subclades and to place M64 precisely within the finer-scale phylogeny.

Geographical Distribution

Available data and reasonable phylogeographic inference place M64 primarily in South Asia with occurrences extending into parts of Southeast Asia and the eastern fringe of the Indian subcontinent. Observations are typically at low frequency and often confined to specific tribal, forager, or isolated rural populations rather than forming a widespread high-frequency signal. The pattern is consistent with an older, low-frequency lineage that persisted regionally while other haplogroups expanded more widely.

Historical and Cultural Significance

Because M64 is found at low and patchy frequencies, it has not been directly tied to high-profile archaeological cultures in the way that some more common lineages have (for example, lineages associated with Neolithic farmer expansions). However, its inferred antiquity and regional distribution mean it could reflect genetic continuity from pre-Neolithic or early-Holocene maternal gene pools in South and Southeast Asia. In this sense, M64 may be informative when studying the demographic substrate of tribal and indigenous populations, local post-glacial persistence, and smaller-scale demographic events (localized expansions, founder effects, or population structure) that are not captured by the dominant haplogroups.

Conclusion

M64 is best regarded as a low-frequency, regionally restricted mtDNA lineage nested within M4"67 that likely arose in South/Southeast Asia during the late Pleistocene–early Holocene. Its full phylogenetic structure and precise geographic history remain under-characterized due to sparse sampling; targeted whole-mitochondrial sequencing of understudied South and Southeast Asian populations is the most direct route to clarifying the age, subclades, and migratory history of M64. Until then, inferences must remain cautious and framed by the broader patterns of M-derived maternal diversity in the region.

Key Points

  • Origins and Evolution
  • Subclades
  • Geographical Distribution
  • Historical and Cultural Significance
  • Conclusion
Chapter II

Tree & Relationships

Phylogenetic context and subclades

Evolution Path

This haplogroup's evolutionary journey from its earliest ancestor to the present.

Steps Haplogroup Age Estimate Archaeology Era Time Passed Immediate Descendants Tested Modern Descendants Ancient Connections
1 M64 Current ~15,000 years ago 🏹 Mesolithic 15,000 years 0 5 0
2 M4"67 — — — 8 111 0
3 M ~60,000 years ago 🦴 Paleolithic 60,000 years 42 2,162 41
4 L3 ~70,000 years ago 🦴 Paleolithic 70,000 years 7 23,542 6
5 L3'4 — — — 2 23,581 0
6 L3'4'6 — — — 2 23,584 0
7 L2'3'4'6 — — — 2 24,475 0
8 L2'3'4'5'6'7 — — — 2 24,488 0
9 L1'2'3'4'5'6'7 — — — 2 24,903 0
10 L ~160,000 years ago 🦴 Paleolithic 160,000 years 2 25,205 5

Subclades (0)

Terminal branch - no known subclades

Siblings (7)

Other branches from the same parent haplogroup

Chapter III

Where in the World

Geographic distribution and modern presence

Place of Origin

South Asia / Southeast Asia

Modern Distribution

The populations where mtDNA haplogroup M64 is found include:

  1. Various tribal and rural populations of the Indian subcontinent (South Asia)
  2. Indigenous and Austroasiatic-speaking groups in northeastern India and Bangladesh
  3. Some Sri Lankan rural and indigenous groups
  4. Selected populations in mainland Southeast Asia (Myanmar, Thailand, Cambodia) at low frequency
  5. Isolated detections among Tibeto-Burman speaking groups along the northeastern fringe of South Asia
  6. Sparse/occasional findings in eastern fringe populations consistent with limited eastward diffusion
CHAPTER IV

When in Time

Your haplogroup in the context of human history

~20k years ago

Last Glacial Maximum

Peak of the last ice age, populations isolated

~15k years ago

Haplogroup M64

Your mtDNA haplogroup emerged in South Asia / Southeast Asia

South Asia / Southeast Asia
~10k years ago

Neolithic Revolution

Agriculture begins, settled communities form

~5k years ago

Bronze Age

Metalworking, writing, and early civilizations

~3k years ago

Iron Age

Iron tools, expanded trade networks

~2k years ago

Classical Antiquity

Greek and Roman civilizations flourish

Present

Present Day

Modern era

Your Haplogroup
Historical Era
Chapter IV-B

Linked Cultures

Ancient cultures associated with mtDNA haplogroup M64

Cultural Heritage

These ancient cultures have been linked to haplogroup M64 based on matching ancient DNA samples from archaeological excavations. The presence of this haplogroup in these cultures provides insights into the migrations and population movements of populations carrying this haplogroup.

Andamanese British Neolithic Goyet Cave Gravettian Katelai Culture Ostuni Culture Spanish Gravettian Udegram Culture Unai Culture
Culture assignments are based on archaeological context of ancient DNA samples and may represent regional associations during specific time periods.
Data

Data & Provenance

Source information and data quality

Last Updated 2026-06-14
Confidence Score 50/100
Coverage Low
Data Source

We use the latest phylotree for MTDNA haplogroup classification and data.